YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IL3B2_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQQMALTWG LCYMALVALC WGHEVTEEEE TVPLKTLECY NDYTNRIICS WADTEDAQGL  60
   61 INMTLLYHQL DKIQSVSCEL SEKLMWSECP SSHRCVPRRC VIPYTRFSNG DNDYYSFQPD 120
  121 RDLGIQLMVP LAQHVQPPPP KDIHISPSGD HFLLEWSVSL GDSQVSWLSS KDIEFEVAYK 180
  181 RLQDSWEDAS SLHTSNFQVN LEPKLFLPNS IYAARVRTRL SAGSSLSGRP SRWSPEVHWD 240
  241 SQPGDKAQPQ NLQCFFDGIQ SLHCSWEVWT QTTGSVSFGL FYRPSPAAPE EKCSPVVKEP 300
  301 QASVYTRYRC SLPVPEPSAH SQYTVSVKHL EQGKFIMSYY HIQMEPPILN QTKNRDSYSL 360
  361 HWETQKIPKY IDHTFQVQYK KKSESWKDSK TENLGRVNSM DLPQLEPDTS YCARVRVKPI 420
  421 SDYDGIWSEW SNEYTWTTDW VMPTLWIVLI LVFLIFTLLL ALHFGRVYGY RTYRKWKEKI 480
  481 PNPSKSLLFQ DGGKGLWPPG SMAAFATKNP ALQGPQSRLL AEQQGVSYEH LEDNNVSPLT 540
  541 IEDPNIIRDP PSRPDTTPAA SSESTEQLPN VQVEGPIPSS RPRKQLPSFD FNGPYLGPPQ 600
  601 SHSLPDLPGQ LGSPQVGGSL KPALPGSLEY MCLPPGGQVQ LVPLSQVMGQ GQAMDVQCGS 660
  661 SLETTGSPSV EPKENPPVEL SVEKQEARDN PMTLPISSGG PEGSMMASDY VTPGDPVLTL 720
  721 PTGPLSTSLG PSLGLPSAQS PSLCLKLPRV PSGSPALGPP GFEDYVELPP SVSQAATSPP 780
  781 GHPAPPVASS PTVIPGEPRE EVGPASPHPE GLLVLQQVGD YCFLPGLGPG SLSPHSKPPS 840
  841 PSLCSETEDL DQDLSVKKFP YQPLPQAPAI QFFKSLKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle