YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IL3RA_MOUSE
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.95
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANLWLILG LLASHSSDLA AVREAPPTAV TTPIQNLHID PAHYTLSWDP APGADITTGA  60
   61 FCRKGRDIFV WADPGLARCS FQSLSLCHVT NFTVFLGKDR AVAGSIQFPP DDDGDHEAAA 120
  121 QDLRCWVHEG QLSCQWERGP KATGDVHYRM FWRDVRLGPA HNRECPHYHS LDVNTAGPAP 180
  181 HGGHEGCTLD LDTVLGSTPN SPDLVPQVTI TVNGSGRAGP VPCMDNTVDL QRAEVLAPPT 240
  241 LTVECNGSEA HARWVARNRF HHGLLGYTLQ VNQSSRSEPQ EYNVSIPHFW VPNAGAISFR 300
  301 VKSRSEVYPR KLSSWSEAWG LVCPPEVMPV KTALVTSVAT VLGAGLVAAG LLLWWRKSLL 360
  361 YRLCPPIPRL RLPLAGEMVV WEPALEDCEV TPVTDA

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	332	0.99
Transmembrane Helix	333	355	0.88
Cytoplasmic	356	396	0.92