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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: I27RA_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLRVARLT PLELLLSLMS LLLGTRPHGS PGPLQCYSVG PLGILNCSWE PLGDLETPPV  60
   61 LYHQSQKYHP NRVWEVKVPS KQSWVTIPRE QFTMADKLLI WGTQKGRPLW SSVSVNLETQ 120
  121 MKPDTPQIFS QVDISEEATL EATVQWAPPV WPPQKALTCQ FRYKECQAEA WTRLEPQLKT 180
  181 DGLTPVEMQN LEPGTCYQVS GRCQVENGYP WGEWSSPLSF QTPFLDPEDV WVSGTVCETS 240
  241 GKRAALLVWK DPRPCVQVTY TVWFGAGDIT TTQEEVPCCK SPVPAWMEWA VVSPGNSTSW 300
  301 VPPTNLSLVC LAPESAPCDV GVSSADGSPG IKVTWKQGTR KPLEYVVDWA QDGDSLDKLN 360
  361 WTRLPPGNLS TLLPGEFKGG VPYRITVTAV YSGGLAAAPS VWGFREELVP LAGPAVWRLP 420
  421 DDPPGTPVVA WGEVPRHQLR GQATHYTFCI QSRGLSTVCR NVSSQTQTAT LPNLHSGSFK 480
  481 LWVTVSTVAG QGPPGPDLSL HLPDNRIRWK ALPWFLSLWG LLLMGCGLSL ASTRCLQARC 540
  541 LHWRHKLLPQ WIWERVPDPA NSNSGQPYIK EVSLPQPPKD GPILEVEEVE LQPVVESPKA 600
  601 SAPIYSGYEK HFLPTPEELG LLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle