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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10119912
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIVHLKTV SELRGKGDRI AKVTFRGQSF YSRVLENCEG VADFDETFRW PVASSIDRNE  60
   61 VLEIQIFNYS KVFSNKLIGT FCMVLQKVVE ENRVEVTDTL MDDSNAIIKT SLSMEVRYQA 120
  121 TDGTVGPWDD GDFLGDESLQ EEKDSQETDG LLPGSRPSTR ISGEKSFRSK GREETKGGRD 180
  181 GEHKAGRSVF SAMKLGKTRS HKEEPQRQDE PAVLEMEDLD HLAIQLGDGL DPDSVSLASV 240
  241 TALTSNVSNK RSKPDIKMEP SAGRPMDYQV SITVIEARQL VGLNMDPVVC VEVGDDKKYT 300
  301 SMKESTNCPY YNEYFVFDFH VSPDVMFDKI IKISVIHSKN LLRSGTLVGS FKMDVGTVYS 360
  361 QPEHQFHHKW AILSDPDDIS AGLKGYVKCD VAVVGKGDNI KTPHKANETD EDDIEGNLLL 420
  421 PEGVPPERQW ARFYVKIYRA EGLPRMNTSL MANVKKAFIG ENKDLVDPYV QVFFAGQKGK 480
  481 TSVQKSSYEP LWNEQVVFTD LFPPLCKRMK VQIRDSDKVN DVAIGTHFID LRKISNDGDK 540
  541 GFLPTLGPAW VNMYGSTRNY TLLDEHQDLN EGLGEGVSFR ARLMLGLAVE ILDTSNPELT 600
  601 SSTEVQVEQA TPVSESCTGR MEEFFLFGAF LEASMIDRKN GDKPITFEVT IGNYGNEVDG 660
  661 MSRPLRPRPR KEPGDEEEVD LIQNSSDDEG DEAGDLASVS STPPMRPQIT DRNYFHLPYL 720
  721 ERKPCIYIKS WWPDQRRRLY NANIMDHIAD KLEEGLNDVQ EMIKTEKSYP ERRLRGVLEE 780
  781 LSCGCHRFLS LSDKDQGRSS RTRLDRERLK SCMRELESMG QQAKSLRAQV KRHTVRDKLR 840
  841 LCQNFLQKLR FLADEPQHSI PDVFIWMMSN NKRIAYARVP SKDLLFSIVE EELGKDCAKV 900
  901 KTLFLKLPGK RGFGSAGWTV QAKLELYLWL GLSKQRKDFL CGLPCGFEEV KAAQGLGLHS 960
  961 FPPISLVYTK KQAFQLRAHM YQARSLFAAD SSGLSDPFAR VFFINQSQCT EVLNETLCPT1020
 1021 WDQMLVFDNL ELYGEAHELR DDPPIIVIEI YDQDSMGKAD FMGRTFAKPL VKMADEAYCP1080
 1081 PRFPPQLEYY QIYRGSATAG DLLAAFELLQ IGPSGKADLP PINGPVDMDR GPIMPVPVGI1140
 1141 RPVLSKYRVE VLFWGLRDLK RVNLAQVDRP RVDIECAGKG VQSSLIHNYK KNPNFNTLVK1200
 1201 WFEVDLPENE LLHPPLNIRV VDCRAFGRYT LVGSHAVSSL RRFIYRPPDR SAPNWNTTGE1260
 1261 VVVSMEPEEP VKKLETMVKL DATSDAVVKV DVAEDEKERK KKKKKGPSEE PEEEEPDESM1320
 1321 LDWWSKYFAS IDTMKEQLRQ HETSGTDLEE KEEMESAEGL KGPMKSKEKS RAAKEEKKKK1380
 1381 NQSPGPGQGS EAPEKKKAKI DELKVYPKEL ESEFDSFEDW LHTFNLLRGK TGDDEDGSTE1440
 1441 EERIVGRFKG SLCVYKVPLP EDVSREAGYD PTYGMFQGIP SNDPINVLVR IYVVRATDLH1500
 1501 PADINGKADP YIAIKLGKTD IRDKENYISK QLNPVFGKSF DIEASFPMES MLTVAVYDWD1560
 1561 LVGTDDLIGE TKIDLENRFY SKHRATCGIA QTYSIHGYNI WRDPMKPSQI LTRLCKEGKV1620
 1621 DGPHFGPHGR VRVANRVFTG PSEIEDENGQ RKPTDEHVAL SALRHWEDIP RVGCRLVPEH1680
 1681 VETRPLLNPD KPGIEQGRLE LWVDMFPMDM PAPGTPLDIS PRKPKKYELR VIVWNTDEVV1740
 1741 LEDDDFFTGE KSSDIFVRGW LKGQQEDKQD TDVHYHSLTG EGNFNWRYLF PFDYLAAEEK1800
 1801 IVMSKKESMF SWDETEYKIP ARLTLQIWDA DHFSADDFLG AIELDLNRFP RGAKTAKQCT1860
 1861 MEMATGEVDV PLVSIFKQKR VKGWWPLLAR NENDEFELTG KVEAELHLLT AEEAEKNPVG1920
 1921 LARNEPDPLE KPNRPDTAFV WFLNPLKSIK YLICTRYKWL IIKIVLALLG LLMLALFLYS1980
 1981 LPGYMVKKLL GA

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