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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MMP8_MOUSE, MM08...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLKTLPLL IFLHTQLANA FPVPEHLEEK NIKTAENYLR KFYNLPSNQF RSSRNATMVA  60
   61 EKLKEMQRFF SLAETGKLDA ATMGIMEMPR CGVPDSGDFL LTPGSPKWTH TNLTYWIINH 120
  121 TPQLSRAEVK TAIEKAFHVW SVASPLTFTE ILQGEADINI AFVSRDHGDN SPFDGPNGIL 180
  181 AHAFQPGQGI GGDAHFDSEE TWTQDSKNYN LFLVAAHEFG HSLGLSHSTD PGALMYPNYA 240
  241 YREPSTYSLP QDDINGIQTI YGPSDNPIQP TGPSTPKACD PHLRFDATTT LRGEIYFFKE 300
  301 KYFWRRHPQL RTVDLNFISL FWPGLPNGLQ AAYEDFDRDL VFLFKGRQYW ALSGYDLQQG 360
  361 YPRDISNYGF PRSVQAIDAA VSYNGKTYFF INNQCWRYDN ERRSMDPGYP KSIPSMFPGV 420
  421 NCRVDAVFLQ DSFFLFFSGP QYFAFNFVSH RVTRVARSNL WLNCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle