YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74218249, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPGSSERAS MSGSSGCPFF LWGLLAFLGL ALVISLIFNI SHYVEKQRRD EIYRYSDDYI  60
   61 PRVDEYYVED APIYGNLENI IPEPLDENCY EQMKGRPQRS ASDPQEVAAP AQVPAEAQMC 120
  121 YASLDHSVKG KRRRPRKQNT NVSDRGKDTQ VYTMDANVSQ INMVESFPPD NQVVEESIHD 180
  181 DPARLFGLIR AKREPVI

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.56
Transmembrane Helix	19	40	0.93
Cytoplasmic	41	197	0.58