YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAR3_MOUSE
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	95	0.99
Transmembrane Helix	96	116	0.94
Cytoplasmic	117	126	0.82
Transmembrane Helix	127	150	0.90
Non-Cytoplasmic	151	169	0.87
Transmembrane Helix	170	192	0.87
Cytoplasmic	193	207	0.92
Transmembrane Helix	208	229	0.93
Non-Cytoplasmic	230	262	0.95
Transmembrane Helix	263	285	0.92
Cytoplasmic	286	300	0.81
Transmembrane Helix	301	322	0.90
Non-Cytoplasmic	323	334	0.88
Transmembrane Helix	335	359	0.87
Cytoplasmic	360	369	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILILVAAG LLFLPVTVCQ SGINVSDNSA KPTLTIKSFN GGPQNTFEEF PLSDIEGWTG  60
   61 ATTTIKAECP EDSISTLHVN NATIGYLRSS LSTQVIPAIY ILLFVVGVPS NIVTLWKLSL 120
  121 RTKSISLVIF HTNLAIADLL FCVTLPFKIA YHLNGNNWVF GEVMCRITTV VFYGNMYCAI 180
  181 LILTCMGINR YLATAHPFTY QKLPKRSFSL LMCGIVWVMV FLYMLPFVIL KQEYHLVHSE 240
  241 ITTCHDVVDA CESPSSFRFY YFVSLAFFGF LIPFVIIIFC YTTLIHKLKS KDRIWLGYIK 300
  301 AVLLILVIFT ICFAPTNIIL VIHHANYYYH NTDSLYFMYL IALCLGSLNS CLDPFLYFVM 360
  361 SKVVDQLNP