YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NFH_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFGSADALL GAPFAPLHGG GSLHYSLSRK AGPGGTRSAA GSSSGFHSWA RTSVSSVSAS  60
   61 PSRFRGAASS TDSLDTLSNG PEGCVVAAVA ARSEKEQLQA LNDRFAGYID KVRQLEAHNR 120
  121 SLEGEAAALR QQKGRAAMGE LYEREVREMR GAVLRLGAAR GQLRLEQEHL LEDIAHVRQR 180
  181 LDEEARQREE AEAAARALAF AQEAEAARVE LQKKAQALQE ECGYLRRHHQ EEVGELLGQI 240
  241 QGCGAAQAQA QAEARDALKC DVTSALREIR AQLEGHAVQS SLQSEEWFRV RLDRLSEAAK 300
  301 VNTDAMRSAQ EEITEYRRQL QARTTELEAL KSTKESLERQ RSELEDRHQA DIASYQDAIQ 360
  361 QLDSELRNTK WEMAAQLREY QDLLNVKMAL DIEIAAYRKL LEGEECRIGF GPSPFSLTEG 420
  421 LPKIPSISTH IKVKSEEMIK VVEKSEKETV IVEGQTEEIR VTEGVTEEED KEAQGQEGEE 480
  481 AEEGEEKEEE ELAAATSPPA EEAASPEKET KSRVKEEAKS PGEAKSPGEA KSPAEAKSPG 540
  541 EAKSPGEAKS PGEAKSPAEP KSPAEPKSPA EAKSPAEPKS PATVKSPGEA KSPSEAKSPA 600
  601 EAKSPAEAKS PAEAKSPAEA KSPAEAKSPA EAKSPATVKS PGEAKSPSEA KSPAEAKSPA 660
  661 EAKSPAEAKS PAEVKSPGEA KSPAEPKSPA EAKSPAEVKS PAEAKSPAEV KSPGEAKSPA 720
  721 AVKSPAEAKS PAAVKSPGEA KSPGEAKSPA EAKSPAEAKS PIEVKSPEKA KTPVKEGAKS 780
  781 PAEAKSPEKA KSPVKEDIKP PAEAKSPEKA KSPVKEGAKP PEKAKPLDVK SPEAQTPVQE 840
  841 EATVPTDIRP PEQVKSPAKE KAKSPEKEEA KTSEKVAPKK EEVKSPVKEE VKAKEPPKKV 900
  901 EEEKTLPTPK TEAKESKKDE APKEAPKPKV EEKKETPTEK PKDSTAEAKK EEAGEKKKAV 960
  961 ASEEETPAKL GVKEEAKPKE KTETTKTEAE DTKAKEPSKP TETEKPKKEE MPAAPEKKDT1020
 1021 KEEKTTESRK PEEKPKMEAK VKEDDKSLSK EPSKPKTEKA EKSSSTDQKE SQPPEKTTED1080
 1081 KATKGEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle