YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LIPK_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWWLLATTCC VLLSGPIDGY KQESITNPEA NMNISELISY WGYPYEKHDV ITEDGYILGT  60
   61 YRIPHGKGCS RKTAPKAVVY LQHGLIASAN NWICNLPNNS LAFLLADSGY DVWLGNSRGN 120
  121 TWSRNHLRLS PKSPQYWAFS WDEMAKYDLP ATVNLILEKS GQKQLFYVGH SQGTTIAFIA 180
  181 FSTNPELAKK IRLFFALAPV ATVKYTRSPM KKLTTLSRKA VKVLFGDKMF STHTWFEQFI 240
  241 ATKVCNRKLF HQLCSNFLFS LSGFDPQNLN MSRLDVYLSQ SPAGTSVQNM LHWAQAVNSG 300
  301 QLQAFDWGNP DQNMMHFNQL TPPVYNISKM RVPTAMWSGG QDVVADAKDT KNLLPKIANL 360
  361 IYYKEIPHYN HMDFYLGQDA PQEVYGDLIR MIEESLQN

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	398	0.99