YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DSE_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTHTRGAPS VFFICLLCCV SAFITDENPE VMIPFTNANY DSHPMLYFSR KDVAELQLRA  60
   61 ASSHEHIAAR LTEAVHTMLT NPLEYLPPWD PKEYSARWNE IYGNNLGALA MFCVLYPENT 120
  121 EARDMAKDYM ERMAAQPSWL VKDAPWDEVP LAHSLVGFAT AYDFLYNYLS KTQQETFLEV 180
  181 IANASGYMYE TSYRRGWGFQ YLHNHQPTNC MALLTGSLIL MNQGYLQEAY LWTKQVLSIM 240
  241 EKSLVLLREV TDGSLYEGVA YGSYTTRSLF QYMFLVQRHF DINHFGHPWL KQHFAFMYRT 300
  301 ILPGFQRTVA IADSNYNWFY GPESQLVFLD KFVMRNGSGN WLADQIRRNR VVEGPGTPSK 360
  361 GQRWCTLHTE FLWYDASLKP VPPPDFGTPT LHYFEDWGVV TYGSALPAEI NRSFLSFKSG 420
  421 KLGGRAIYDI VHRNKYKDWI KGWRNFNAGH EHPDQNSFTF APNGVPFITE ALYGPKYTYF 480
  481 NNVLMFSPAV SKSCFSPWEG QVTEDCSSKW SKYKHDLAAS CQGRVIAADE KDGVVFIRGE 540
  541 GVGAYNPMLN LKHIQRNLIL LHPQLLLLVD QIHLGEESPL ETAASFFHNV DVPFEETVVD 600
  601 GVHGALIRQR DGLYKMYWMD DTGYSEKANF ASVMYPRGYP YNGTNYVNVT MHLRSPITRA 660
  661 AYLFIGPSVD VQSFSIHGDP QRLDVFIATS EHAYATYLWT GENTGHSAFA QVIADHQKIL 720
  721 FDQSSAIKST AVPEVKDYAA IVEQNLQHFK PVFQLLEKQI LSRVQNTASF RKTAERLLRF 780
  781 SDKRQTEEAI DRIFAISQQQ RQQRGKSKKS RKAGKHYKFV DAVPDIFAQI EVNEKKIRQK 840
  841 AQVLAQREQP IDEDEEMKDL LDFADVTYEK HKNEGSVKGG FGQVRMVTSH NRAPSLSASY 900
  901 TRLFLILNIA IFFVMLAMQL TYFQRAQSLH GQRCLYAVLL IDSCVLLWLY SSCSQSQC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle