YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PTK7_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGARPLTLLR ALLLPLLAGA QAAIVFIKEP SSQDALQGRR ALLRCEVEAP DPVHVYWLLN  60
   61 GVPVQDTERR FAQGSSLSFA AVDRLQDSGA FQCVARDNVT GEEVRSTNAS FNIKWIEAGP 120
  121 VVLKHPASEA EIQPQTQVTL RCHIDGHPRP TYQWFRDGTP LSDDQSTHTV SSRERNLTLR 180
  181 PASPEHSGLY SCCAHNAFGQ ACSSQNFTLS VADESFARVV LAPQDVVVAR NEEAMFHCQF 240
  241 SAQPPPSLQW VFEDETPITN RSRPPHLRRA VVFANGSLLL TQVRPRNAGV YRCIGQGQRG 300
  301 PPIVLEATLH LAEIEDMLPF EPRVFIAGDE ERVTCPAPQG LPTPSVWWEH AGVPLPAHGR 360
  361 VHQKGLELVF VTIAESDTGV YTCHASNLAG QRRQDVNITV ATVPTWLRKP QDSQLEEGKP 420
  421 GYLHCLTQAT PKPTVIWYRN QMLISEDSRF EVSKNGTLRI NSVEVYDGTL YRCVSSTPAG 480
  481 SIEAQARVQV LEKLKFTPPP QPQQCMEFDK EATVPCSATG REKPTVKWVR ADGSSLPEWV 540
  541 TDNAGTLHFA RVTRDDAGNY TCIASNEPQG QIRAHVQLTV AVFITFKVEP ERTTVYQGHT 600
  601 ALLRCEAQGD PKPLIQWKGK DRILDPTKLG PRMHIFQNGS LVIHDVAPED SGSYTCIAGN 660
  661 SCNIRHTEAP LLVVDKPVME DSEGPGSPPP YKMIQTIGLS VGAAVAYIIA VLGLMFYCKK 720
  721 RCKAKRLQKQ PEGEEPEMEC LNGGPLQNGQ PSAEIQEEVA LTSLGSGPPA TNKRHSAGDR 780
  781 MHFPRASLQP ITTLGKSEFG EVFLAKAQGV EEGATETLVL VKSLQSRDEQ QQLDFRREVE 840
  841 MFGKLNHANV VRLLGLCREA EPHYMVLEYV DLGDLKQFLR ISKNKDEKLK SQPLSTKQKV 900
  901 ALCSQVALGM EHLSNNRFVH KDLAARNCLI SAQRQVKVSA LGLSKDVYNS EYYHFRQAWV 960
  961 PLRWMSPEAV LEGDFSTKSD VWAFGVLMWE VFTHGEMPHG GQADDEVLAD LQAGKARLPQ1020
 1021 PEGCPSKLYR LMQRCWAPNP KDRPSFSEIA STLGDSPADS KQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle