YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26328841, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPSMANSMA QSRPRMGSLS STGSPSPSSR SETPLTSNGT MLVLSMSWSL LASSPPWGRP  60
   61 GAHLKGGAKR VIISAPSADA PMFVMGVNQE KYDISLKVVS TASCTTNCLA PLAKVIHDNF 120
  121 GIVEGLMTMV HAITATQETV NGPSGKLWCD GHGAAQNIIP ASTGAAKAVG KVIPELNGKL 180
  181 TGITFHVSTP NMSTVDLTRC LEKPAKYDD

Type	Start	End	Confidence
Signal Peptide	1	31	0.64
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	209	0.93