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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NEO1_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEREAGRL LCTSSSRRCC PPPPLLLLLP LLLLLGRPAS GAAATKSGPR RQSQGASVRT  60
   61 FTPFYFLVEP VDTLSVRGSS VILNCSAYSE PSPNIEWKKD GTFLNLESDD RRQLLPDGSL 120
  121 FISNVVHSKH NKPDEGFYQC VATVDNLGTI VSRTAKLTVA GLPRFTSQPE PSSVYVGNSA 180
  181 ILNCEVNADL VPFVRWEQNR QPLLLDDRIV KLPSGTLVIS NATEGDGGLY RCIVESGGPP 240
  241 KFSDEAELKV LQDPEEIVDL VFLMRPSSMM KVTGQSAVLP CVVSGLPAPV VRWMKNEEVL 300
  301 DTESSGRLVL LAGGCLEISD VTEDDAGTYF CIADNGNKTV EAQAELTVQV PPGFLKQPAN 360
  361 IYAHESMDIV FECEVTGKPT PTVKWVKNGD VVIPSDNFKI VKEHNLQVLG LVKSDEGFYQ 420
  421 CIAENDVGNA QAGAQLIILE HDVAIPTLPP TSLTSATTDH LAPATTGPLP SAPRDVVASL 480
  481 VSTRFIKLTW RTPASDPHGD NLTYSVFYTK EGVDRERVEN TSQPGEMQVT IQNLMPATVY 540
  541 IFKVMAQNKH GSGESSAPLR VETQPEVQLP GPAPNIRAYA TSPTSITVTW ETPLSGNGEI 600
  601 QNYKLYYMEK GTDKEQDIDV SSHSYTINGL KKYTEYSFRV VAYNKHGPGV STQDVAVRTL 660
  661 SDVPSAAPQN LSLEVRNSKS IVIHWQPPSS TTQNGQITGY KIRYRKASRK SDVTETLVTG 720
  721 TQLSQLIEGL DRGTEYNFRV AALTVNGTGP ATDWLSAETF ESDLDETRVP EVPSSLHVRP 780
  781 LVTSIVVSWT PPENQNIVVR GYAIGYGIGS PHAQTIKVDY KQRYYTIENL DPSSHYVITL 840
  841 KAFNNVGEGI PLYESAVTRP HTDTSEVDLF VINAPYTPVP DPTPMMPPVG VQASILSHDT 900
  901 IRITWADNSL PKHQKITDSR YYTVRWKTNI PANTKYKNAN ATTLSYLVTG LKPNTLYEFS 960
  961 VMVTKGRRSS TWSMTAHGAT FELVPTSPPK DVTVVSKEGK PRTIIVNWQP PSEANGKITG1020
 1021 YIIYYSTDVN AEIHDWVIEP VVGNRLTHQI QELTLDTPYY FKIQARNSKG MGPMSEAVQF1080
 1081 RTPKADSSDK MPNDQALGSA GKGSRLPDLG SDYKPPMSGS NSPHGSPTSP LDSNMLLVII1140
 1141 VSVGVITIVV VVVIAVFCTR RTTSHQKKKR AACKSVNGSH KYKGNCKDVK PPDLWIHHER1200
 1201 LELKPIDKSP DPNPVMTDTP IPRNSQDITP VDNSMDSNIH QRRNSYRGHE SEDSMSTLAG1260
 1261 RRGMRPKMMM PFDSQPPQPV ISAHPIHSLD NPHHHFHSSS LASPARSHLY HPSSPWPIGT1320
 1321 SMSLSDRANS TESVRNTPST DTMPASSSQT CCTDHQDPEG ATSSSYLASS QEEDSGQSLP1380
 1381 TAHVRPSHPL KSFAVPAIPP PGPPLYDPAL PSTPLLSQQA LEPSTFHSVK TASIGTLGRS1440
 1441 RPPMPVVVPS APEVQETTRM LEDSESSYEP DELTKEMAHL EGLMKDLNAI TTA

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