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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CD6_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLFLGIAGL LTAVLSGLPS PAPSGQHKNG TIPNMTLDLE ERLGIRLVNG SSRCSGSVKV  60
   61 LLESWEPVCA AHWNRAATEA VCKALNCGDS GKVTYLMPPT SELPPGATSG NTSSAGNTTW 120
  121 ARAPTERCRG ANWQFCKVQD QECSSDRRLV WVTCAENQAV RLVDGSSRCA GRVEMLEHGE 180
  181 WGTVCDDTWD LQDDHVVCKQ LKCGWAVKAL AGLHFTPGQG PIHRDQVNCS GTEAYLWDCP 240
  241 GRPGDQYCGH KEDAGVVCSE HQSWRLTGGI DSCEGQVEVY FRGVWSTVCD SEWYPSEAKV 300
  301 LCRSLGCGSA VARPRAVPHS LDGRMYYSCK GQEPALSTCS WRFNNSNLCS QSRAARVVCS 360
  361 GSQRHLNLST SEVPSRVPVT IESSVPVSVK DKDSQGLTLL ILCIVLGILL LVSTIFIVIL 420
  421 LLRAKGQYAL PASVNHQQLS TANQAGINNY HPVPITIAKE APMLFIQPRV PADSDSSSDS 480
  481 DYEHYDFSSQ PPVALTTFYN SQRHRVTEEE AQQNRFQMPP LEEGLEELHV SHIPAADPRP 540
  541 CVADVPSRGS QYHVRNNSDS STSSEEGYCN DPSSKPPPWN SQAFYSEKSP LTEQPPNLEL 600
  601 AGSPAVFSGP SADDSSSTSS GEWYQNFQPP PQHPPAEQFE CPGPPGPQTD SIDDDEEDYD 660
  661 DIGAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle