YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSMF1_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLEVLFAS AAPSMSCPQD ALVCFLHWEV VTNGYYALGT GDQPGPSDKK SELLPAKWNS  60
   61 NKELYALRYE SKDGARKLLL KAVSVENGMI INVLELGTQQ VADLTLNLDD YIDAEDLSDF 120
  121 HRTYKNSEEL RSQIRSGIIT PIHEQWEKAR ANSPPREFPP ATAREVDPLQ ISSHRPHTSR 180
  181 QPAWRDPLSP FAVGGDDLDP FGCQRGGMIV DPLRSGFPRV LIDPSSGLPN RLPPGAVPPG 240
  241 ARFDPFGPIG TSPSGPNPDH LPPPGYDDMY L

Type	Start	End	Confidence
Signal Peptide	1	18	0.64
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	271	0.99