YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IN80C_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQIPIVAA TSTPAVARNS KKRPASPSHN SSGGGYGASK KKKLSASGFA QGVSIEAMNE  60
   61 SKMASSELSS GPVEKAAKPL PFKDPNFVHS GHGGAVAGKK NRTWKNLKQI LAAERALPWQ 120
  121 LNDPNYFSID APPSFKPAKK YSDISGLLAN YTDPQSKLRF STVEEFSYIR RLPSDVVTGY 180
  181 LALRKATSIV P

Type	Start	End	Confidence
Signal Peptide	1	17	0.67
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	191	0.99