YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ECHM_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRALLPR ACSSLLSSVR CPELRRFASG ANFQYIITEK KGKNSSVGLI QLNRPKALNA  60
   61 LCNGLIEELN QALETFEQDP AVGAIVLTGG DKAFAAGADI KEMQNRTFQD CYSSKFLSHW 120
  121 DHITRVKKPV IAAVNGYALG GGCELAMMCD IIYAGEKAQF GQPEILLGTI PGAGGTQRLT 180
  181 RAVGKSLAME MVLTGDRISA QDAKQAGLVS KIFPVEKLVE EAIQCAEKIA SNSKIVVAMA 240
  241 KESVNAAFEM TLTEGNKLEK RLFYSTFATD DRREGMTAFV EKRKANFKDH

Type	Start	End	Confidence
Signal Peptide	1	21	0.85
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	290	0.99