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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CAD15_MOUSE, CAD...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSALLLALG LLAQSLGLSW AVPEPEPSTL YPWRRASAPG RVRRAWVIPP ISVSENHKRL  60
   61 PYPLVQIKSD KQQLGSVIYS IQGPGVDEEP RNVFSIDKFT GRVYLNATLD REKTDRFRLR 120
  121 AFALDLGGST LEDPTDLEIV VVDQNDNRPA FLQDVFRGHI LEGAIPGTFV TRAEATDADD 180
  181 PETDNAALRF SILEQGSPEF FSIDEHTGEI RTVQVGLDRE VVAVYNLTLQ VADMSGDGLT 240
  241 ATASAIISID DINDNAPEFT KDEFFMEAAE AVSGVDVGRL EVEDKDLPGS PNWVARFTIL 300
  301 EGDPDGQFKI YTDPKTNEGV LSVVKPLDYE SREQYELRVS VQNEAPLQAA APRARRGQTR 360
  361 VSVWVQDTNE APVFPENPLR TSIAEGAPPG TSVATFSARD PDTEQLQRIS YSKDYDPEDW 420
  421 LQVDGATGRI QTQRVLSPAS PFLKDGWYRA IILALDNAIP PSTATGTLSI EILEVNDHAP 480
  481 ALALPPSGSL CSEPDQGPGL LLGATDEDLP PHGAPFHFQL NPRVPDLGRN WSVSQINVSH 540
  541 ARLRLRHQVS EGLHRLSLLL QDSGEPPQQR EQTLNVTVCR CGSDGTCLPG AAALRGGGVG 600
  601 VSLGALVIVL ASTVVLLVLI LFAALRTRFR GHSRGKSLLH GLQEDLRDNI LNYDEQGGGE 660
  661 EDQDAYDINQ LRHPVEPRAT SRSLGRPPLR RDAPFSYVPQ PHRVLPTSPS DIANFISDGL 720
  721 EAADSDPSVP PYDTALIYDY EGDGSVAGTL SSILSSLGDE DQDYDYLRDW GPRFARLADM 780
  781 YGHQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle