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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: COAA1_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPQIPFLLL MFLTLVHGMF YAERYQTPTG IKGPLASPKT QYFIPYAIKS KGIPVRGEQG  60
   61 IPGPPGPTGP RGHPGPSGPP GKPGYGSPGL QGEPGLPGPP GISATGKPGL PGPPGKPGER 120
  121 GPYGHKGDIG PAGLPGPRGP PGPPGIPGPA GISVPGKPGQ QGLTGAPGPR GFPGEKGAQG 180
  181 APGVNGRKGE TGYGSPGRPG ERGLPGPQGP IGPPGPSGVG RRGENGFPGQ PGIKGDRGFP 240
  241 GEMGPSGPPG PQGPPGKQGR EGIGKPGAIG SPGQPGIPGE KGHPGAPGIA GPPGAPGFGK 300
  301 QGLPGLRGQR GPAGLPGAPG AKGERGPAGH PGEPGLPGSP GNMGPQGPKG IPGNHGIPGA 360
  361 KGEIGLVGPA GPPGARGARG PPGLDGKTGY PGEPGLNGPK GNPGLPGQKG DPGVGGTPGL 420
  421 RGPVGPVGAK GVPGHNGEAG PRGEPGIPGT RGPTGPPGVP GFPGSKGDPG NPGAPGPAGI 480
  481 ATKGLNGPTG PPGPPGPRGH SGEPGLPGPP GPPGPPGQAV MPDGFIKAGQ RPRLSGMPLV 540
  541 SANHGVTGMP VSAFTVILSK AYPAVGAPIP FDEILYNRQQ HYDPRSGIFT CKIPGIYYFS 600
  601 YHVHVKGTHV WVGLYKNGTP TMYTYDEYSK GYLDQASGSA IMELTENDQV WLQLPNAESN 660
  661 GLYSSEYVHS SFSGFLVAPM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle