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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLCA2_MOUSE
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHRDSTGPV IGLKLVTLLF TLSPELLFLG AGLKLKENGY DGLLVAINPR VPEDLKLITN  60
   61 IKEMITEASF YLFNATKRRV FFRNVQILVP ATWTDHNYSR VRQESYDKAN VIVAEQSEEH 120
  121 GDDPYTLQHR GCGQEGRYIH FTPSFLLNDE LAAGYGARGR VFVHEWAHLR WGVFDEYNND 180
  181 KPFYVNGRNE IQVTRCSSDI TGVFVCEKGL CPHEDCIISK IFREGCTFLY NSTQNATGSI 240
  241 MFMPSLPSVV EFCNESTHNQ EAPNLQNQVC SLRSTWDVIT ASSDLNHSLP VHGVGLPAPP 300
  301 TFSLLQAGDR VVCLVIDVSR KMAEGDRLLR LQQAAELYLM QVVEAHTFVG IVTFDSKGEI 360
  361 RASLQQIYSD DDRKLLVSYL PTAVSTDAET NICAGVKKGF EVVEERNGRA DGSVLILVTS 420
  421 GADEHIANCL LTSMNSGSTI HSMALGSSAA RKVGELSRLT GGLKFFIPDK FTSNGMTEAF 480
  481 VRISSGTGDI FQQSLQVESV CETVQPQHQL ADTMTVDSAV GNDTLFLVTW QTGGPPEIAL 540
  541 LDPSGRKYNT GDFIINLAFR TASLKIPGTA KHGHWTYTLN NTHHSPQALK VTVASRASSL 600
  601 AMSPATLEAF VERDSTYFPQ PVIIYANVRK GLHPILNATV VATVEPEAGD PVVLQLLDGG 660
  661 AGADVIRNDG IYSRYFSSFA VSGSYSLTVH VRHSPSTSTL ALPVPGNHAM YVPGYITNDN 720
  721 IQMNAPKNLG HRPVKERWGF SRVSSGGSFS VLGVPDGPHP DMFPPCKITD LEAMKVEDDV 780
  781 VLSWTAPGED FDQGQTTSYE IRMSRSLWNI RDDFDNAILV NSSELVPQHA GTRETFTFSP 840
  841 KLVTHELDHE LAEDAQEPYI VYVALRAMDR SSLRSAVSNI ALVSMSLPPN SSPVVSRDDL 900
  901 ILKGVLTTVG LIAILCLIMV VAHCIFNRKK RPSRKENETK FL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle