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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLD4_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKKKEHPEM RIPLQTAVEV SDWPCSTSHD PHSGLGMVLG MLAVLGLSSV TLILFLWQGA  60
   61 TSFTSHRMFP EEVPSWSWET LKGDAEQQNN SCQLILVESI PEDLPFAAGS PTAQPLAQAW 120
  121 LQLLDTARES VHIASYYWSL TGLDIGVNDS SSRQGEALLQ KFQQLLLRNI SVVVATHSPT 180
  181 LAKTSTDLQV LAAHGAQIRQ VPMKQLTGGV LHSKFWVVDG RHIYVGSANM DWRSLTQVKE 240
  241 LGAIIYNCSN LAQDLEKTFQ TYWVLGTPQA VLPKTWPRNF SSHINRFHPL RGPFDGVPTT 300
  301 AYFSASPPSL CPHGRTRDLD AVLGVMEGAR QFIYVSVMEY FPTTRFTHHA RYWPVLDNAL 360
  361 RAAALNKGVH VRLLVSCWFN TDPTMFAYLR SLQAFSNPSA GISVDVKVFI VPVGNHSNIP 420
  421 FSRVNHSKFM VTDKTAYVGT SNWSEDYFSH TAGVGLIVSQ KTPRAQPGAT TVQEQLRQLF 480
  481 ERDWSSHYAM DLDRQVPSQD CVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle