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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TBX6_MOUSE
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHPRELYPS LGTGYRLGHP QPGADSTFPP ALTEGYRYPD LDTSKLDCFL SGIEAAPHTL  60
   61 AAAAPLPPSP IALGPETAPP PPEALHSLPG VSLSLENQEL WKEFSAVGTE MIITKAGRRM 120
  121 FPACRVSVTG LDPEARYLFL LDVVPVDGAR YRWQGPDWEP SGKAEPRLPD RVYIHPDSPA 180
  181 TGAHWMRQPV SFHRVKLTNS TLDPHGHLIL HSMHKYQPRI HLVRATQLCS QHWGGVASFR 240
  241 FPETTFISVT AYQNPRITQL KIAANPFAKG FRENGRNCKR ERDARVKRKL RGPEPVATEA 300
  301 CGSGDTPGGP CDSTLGGDIR DSDPEQAPTP GKLLLPQLLH VGAPVLRPTF YTLPLFMAPP 360
  361 VTYQPGPPAW LRLQTLAPSP LLSCISGPTA WTRGLCLSGS SICTILCPTL HPRGSLPSTV 420
  421 PRTWRLSGHG IQANVLSLGV VTLCHLPLIL QLPSPSLVAS ALKWYPSPPT KWLAWASLPP 480
  481 FSSHLDFTPP PLASKLRQGS SESSWGLLPL SSHLSANGGS LCLAKWGSQP STPTSWGPCY 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle