YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12230015, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAEASGSD GKGQEVETSV TYYRLEEVAK RNSLKELWLV IHGRVYDVTR FLNEHPGGEE  60
   61 VLLEQAGVDA SESFEDVGHS SDAREMLKQY YIGDIHPSDL KPESGSKDPS QNDTCKSCWA 120
  121 YWILPIIGAV LLGFLYRYYT SESKSS

Type	Start	End	Confidence
Cytoplasmic	1	117	0.57
Transmembrane Helix	118	139	0.89
Non-Cytoplasmic	140	146	0.57