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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27693683, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPGSAGLLR LSAGVVVPPV LLASAPPPAA PLLPGLPGWP APSEPVLPLL PLPSAPDSAA  60
   61 AAAAHPFPAL HGQWLFGGHS PSLGLPPSST VELVPVFPHL CPSALATPIG KSWIDKRIPN 120
  121 CKIFFNNSFA LDSTWIHPEE SRFFHGHEKP RLLANQVAVS LSRPAPASRP LPTVVLAPQP 180
  181 IPGGCHNSLK VTSSPAIAIA TAAAAAMVSV DPENLRGPSP SSVQPRHFLT LAPIKIPLRT 240
  241 SPVSDTRTER GRVARPPALM LRAQKSRDGD KEDKEPPPML GGGEDSTARG NRPVASTQVP 300
  301 GSPWCVVWTG DDRVFFFNPT MHLSVWEKPM DLKDRGDLNR IIEDPPHKRK LEAPATDNSD 360
  361 GSSSEDNRED QDVKTKRNRT EGCGSPKPEE AKREDKGTRT PPPQILLPLE ERVTHFRDML 420
  421 LERGVSAFST WEKELHKIVF DPRYLLLNSE ERKQIFEQFV KTRIKEEYKE KKSKLLLAKE 480
  481 EFKKLLEKSK VSPRTTFKEF AEKYGRDQRF RLVQKRKDQE HFFNKFILIL KKRDKENRLR 540
  541 LRKMR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle