YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51095164, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGAAAAAAA AAAAMLPAQE AAKLYHTNYV RNSRAIGVLW AIFTICFAIV NVVCFIQPYW  60
   61 IGDGVDTPQA GYFGLFHYCI GNGFSRELTC RGSFTDFSTL PSGAFKAASF FIGLSMMLII 120
  121 ACIICFTLFF FCNTATVYKI CAWMQLTSAA CLVLGCMIFP DGWDSDEVKR MCGEKTDKYT 180
  181 LGACSVRWAY ILAIIGILDA LILSFLAFVL GNRQDSLMAE ELKAENKVLL SQYSLE

Type	Start	End	Confidence
Cytoplasmic	1	35	0.53
Transmembrane Helix	36	61	0.81
Non-Cytoplasmic	62	106	0.72
Transmembrane Helix	107	131	0.90
Cytoplasmic	132	139	0.67
Transmembrane Helix	140	161	0.88
Non-Cytoplasmic	162	188	0.77
Transmembrane Helix	189	210	0.94
Cytoplasmic	211	236	0.78