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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26996622
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRSWRCPGSL AGKQLRGRRG GPRRPKRLAG GAVGWVLLVR GVHSVRAGGG RPPRAADMKK  60
   61 DVRILLVGEP RVGKTSLIMS LVSEEFPEEV PPRAEEITIP ADVTPERVPT HIVDYSEAEQ 120
  121 SDEQLHQEIS QANVICIVYA VNNKHSIDKV TSRWIPLINE RTDKDSRLPL ILVGNKSDLV 180
  181 EYSSMETILP IMNQYTEIET CVECSAKNLK NISELFYYAQ KAVLHPTGPL YCPEEKEMKP 240
  241 ACIKALTRIF KISDQDNDGT LNDAELNFFQ RICFNTPLAP QALEDVKNVV RKHISDGVAD 300
  301 SGLTLKGFLF LHTLFIQRGR HETTWTVLRR FGYDDDLDLT PEYLFPLLKI PPDCTTELNH 360
  361 HAYLFLQSTF DKHDLDRDCA LSPDELKDLF KVFPYIPWGP DVNNTVCTNE RGWITYQGFL 420
  421 SQWTLTTYLD VQRCLEYLGY LGYSILTEQE SQASAVTVTR DKKIDLQKKQ TQRNVFRCNV 480
  481 IGVKNCGKSG VLQALLGRNL MRQKKIREDH KSYYAINTVY VYGQEKYLLL HDISESEFLT 540
  541 EAEIICDVVC LVYDVSNPKS FEYCARIFKQ HFMDSRIPCL IVAAKSDLHE VKQEYSISPT 600
  601 DFCRKHKMPP PQAFTCNTAD APSKDIFVKL TTMAMYPHVT QADLKSSTFW LRASFGATVF 660
  661 AVLGFAMYKA LLKQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle