YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE40572
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKFERLDQ AALLTLATIA VLNFQFSTYN LKFLIPAELY THFPAIIHQE IFPATRIIAK  60
   61 LIPGIEHSAS ALRLPNTGQL FCFVETSERY MDERVPSIAS TWLRRCDNGR FFSKTPLLNL 120
  121 NITYSTVYKN LEDSYSDLFR KSIFGFYYSY VHISKSFDWY LKADDDTYFA MDHLREYLNT 180
  181 LDPSKPLYLG YKNGYNSGGS GYILSNAAVK LFVEKSYHDE YGCPYDWAED HGIGRCLARV 240
  241 GIYPTDTRDD KGLNSFVPFK PSELAEFGPD WHFYPAVQFA SQKFVSLHRL PPAMMLVLDE 300
  301 ILHPKLGRND TNPIVVNLDS FKY

Type	Start	End	Confidence
Signal Peptide	1	27	0.57
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	323	0.98