YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPZL3
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQRGAAGSR GCALFPLLGV LFFQGVYIVF SLEIRADAHV RGYVGEKIKL KCTFKSTSDV  60
   61 TDKLTIDWTY RPPSSSHTVS IFHYQSFQYP TTAGTFRDRI SWVGNVYKGD ASISISNPTI 120
  121 KDNGTFSCAV KNPPDVHHNI PMTELTVTER GFGTMLSSVA LLSILVFVPS AVVVALLLVR 180
  181 MGRKAAGLKK RSRSGYKKSS IEVSDDTDQE EEEACMARLC VRCAECLDSD YEETY

Type	Start	End	Confidence
Cytoplasmic	1	10	0.78
Transmembrane Helix	11	30	0.83
Non-Cytoplasmic	31	158	0.97
Transmembrane Helix	159	181	0.92
Cytoplasmic	182	235	0.98