YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENSMMUG000000129...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIWVVLLSR IIMKEKQSTK VYLSLIPIIS GVLLATVTEL SFDMWGLVSA LAATLCFSLQ  60
   61 NIFSKKVLRD SRIHHLRLLN ILGCHAVFFM IPTWVLVDLS AFLVSSDLTY VYQWPWTLLL 120
  121 LAVSGFCNFA QNVIAFSILN LVSPLSYSVA NATKRIMVIT VSLIMLRNPV TSTNVLGMMT 180
  181 AILGVFLYNK TKYDANQQAR KHLLPVTTAD LSSKERHRSP LEKPHNGLLF PQHGDYQYGR 240
  241 NNILTDHFQY SRQSYPNSYS LNRYDV

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	38	0.97
Non-Cytoplasmic	39	44	0.76
Transmembrane Helix	45	64	0.94
Cytoplasmic	65	77	0.85
Transmembrane Helix	78	97	0.91
Non-Cytoplasmic	98	115	0.80
Transmembrane Helix	116	142	0.79
Cytoplasmic	143	163	0.70
Transmembrane Helix	164	188	0.59
Non-Cytoplasmic	189	266	0.55