YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117169184
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTGNLKGP SFSQHFTMTV ICIVLLQVLL QALTVAVTYM YFNNEVKQLQ DNYSKIGLAC  60
   61 FSKEDGDFWD STDEGILNRP CLQVKRQLYQ LIEEVTLRTF EKTISTVPEK QLSTPPLPRG 120
  121 RRPQRVAAHI TGITRRSNLA LIPISKDGKT LGQKIETWES SRRGHSFLNH VHLRNGELVI 180
  181 QEEGLYYIYS QTYYRFKEAK EASKTVSKDG GRIKQMVQYI YKYTSYPDPI LLMKSARNSC 240
  241 WSREAEYGLY SIYQGGLFEL KENDRIFVSV TNEHLMDLDQ EASFFGA

Type	Start	End	Confidence
Signal Peptide	1	36	0.49
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	287	0.93