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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACBD5_RAT
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLSFYAGS WESWICCCCV IPVDRPWDRG RRWQLEMADT RSVYETRFEA AVKVIQSLPK  60
   61 NGSFQPTNEM MLRFYSFYKQ ATEGPCKLSR PGFWDPIGRY KWDAWSSLGD MTKEEAMIAY 120
  121 VEEMKKIIET MPMTEKVEEL LHVIGPFYEI VEDKKNSKSS DLTSDLGNVL TSSNAKAVNG 180
  181 KAESSDSGAE SEEEEAQEEL KGAEQSGSDD KKMMTKSTDK NLEIIVTNGY KDSFAQDSDI 240
  241 HTDSSRSARR SEDKKPTDQS SQQTGNTVLC VHQDTNEDPG EDASGVHHLT SDSDSEVYCD 300
  301 SMEQFGQEEY YLGGDPAQHL EGSGFCEDAQ LSPGNGSIGK MQMRAVKGKG EVKHGGEDGR 360
  361 SSSGTPHREK RGGESEDISG VRRGRGHRMP HLSEGTKGRQ VGSGGDGERW GSDRGSRGSL 420
  421 NEQIALVLIR LQEDMQNVLQ RLHKLETLTA SQAKLSWQTS NQPSSQRPSW WPFEMSPGAL 480
  481 AFAIIWPFIA QWLVHLYYQR RRRKLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle