YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116266543
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIIIAIRNH PTLHKPMYSG NYFMVNLALA EVCYTSNIVP KMLLIIIADQ KTISVVGCLA  60
   61 QFYFFGSLAA TECLLLAVMS YDRYLAICQP LRYPILMTGS LCFRLAIGSW FCCFFLTAIT 120
  121 MVLLCRQNFC GPNEIDHFFC DFAPLIHLSC MDT

Type	Start	End	Confidence
Cytoplasmic	1	19	0.76
Transmembrane Helix	20	39	0.70
Non-Cytoplasmic	40	58	0.56
Transmembrane Helix	59	81	0.80
Cytoplasmic	82	100	0.62
Transmembrane Helix	101	124	0.88
Non-Cytoplasmic	125	153	0.68