YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116668050
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLKKAQNNLL NSQIKDAVDA TVSFYQTLTE KYGEKYSKMA QELADKSKGK KIGNVNEALA  60
   61 AFEKYKDVLN KKFSKADRDA IFNALASVKY DDWAKHLDQF AKYLKITGHV SFGYDVVSDI 120
  121 LKIKDTGDWK PLFLTLEKKA ADAGVSYVVA LLFSLLAGTT LGIWGIAIVT GILCSYIDKN 180
  181 KLNTINEVLG I

Type	Start	End	Confidence
Cytoplasmic	1	144	0.85
Transmembrane Helix	145	168	0.84
Non-Cytoplasmic	169	191	0.81