YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FUNDC2
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METSAPRAGS QVVATTARHS AAYRADPLRV SSRDKLTEMA ASSQGNFEGN FESLDLAEFA  60
   61 KKQPWWRKLF GQESGPSAEK YSVATQLFIG GVTGWCTGFI FQKVGKLAAT AVGGGFFLLQ 120
  121 LANHTGYIKV DWQRVEKDMK KAKEQLKIRK SNQIPTEVRS KAEEVVSFVK KNVLVTGGFF 180
  181 GGFLLGMAS

Type	Start	End	Confidence
Cytoplasmic	1	82	0.70
Transmembrane Helix	83	101	0.53
Non-Cytoplasmic	102	106	0.68
Transmembrane Helix	107	127	0.52
Cytoplasmic	128	167	0.71
Transmembrane Helix	168	188	0.54
Non-Cytoplasmic	189	189	0.81