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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116487549, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLFCAALLA LGSVDSVIGD SKAVTTTLTT KWPSTPLLLE ASEFLAEESQ DKFWVFVEAN  60
   61 QNIENDHDDT DQAYYDLILK RAGELLSPVQ LNLLKFSLSL RAYSSTIHSF QQIASNEPPP 120
  121 SGCKAFFNVH GQKSCDSERL QGMLDNALER PKPNLFKGDH RYHSANPDAP VVILYAEMGT 180
  181 KEFSRLHQLM LSKANKGMIT YVLRHFLASP SKSKVHLSGY GVELAIKNQE YKAKDDTQVQ 240
  241 AGADANATVI GENDPVDEVQ GFLFGKLKTI YPELKEQLKE LRKHLIESTN EMAPLKVWQM 300
  301 QDLSFQTAAR ILAAPSVDAL NVMKDLSQNF PTKARSITKT VVNSEIRKEI EENQKYFKGT 360
  361 LGLQPGDSAL FINGLHIDLD VQDIFSVFDV LRNEARVMEG LRSLLIETPY IHDILKLNVQ 420
  421 PSDSDYAVDI RNPAVHWINN LETDGRYASW PSNVQELLRP TFPGVIRQIR KNFHNLVMIL 480
  481 DPTHENTAEL LGVAEMFYSN NIPLRIGVVF VVNDSDDVDG MQDPGVALLR AFNYIADDVD 540
  541 GQMAFDAVIS IMNRIPSGDK LKVEHVVGVL EKRYPYVEIS SILGPDSAYD NNRKEGKAYY 600
  601 EQTGVGPLPV VLYNGMPLQR EQLDPDELET VVMHKILETT SFFQRTVYLG ELNSDHDVVD 660
  661 YIMNQPNVVP RINSRILSTS RNYLDLSATN NHFIDEYARF LFLDAKDKNA AVANSMNYMT 720
  721 KKDDGIIRPV TFWVVGDFDQ PSGRQLLYDA IRHMKTSNNV RLGLINNPSE NPSNENSLIA 780
  781 RAIWAAMQTQ TSNNAKNFIT KMAKEETAQA LYGGSDIAEF AVGGMDVPLF KSAYESPNVN 840
  841 FLLAHSAYCR DVLKLQKGQR AVISNGRIIG PLEEREVFNQ DDFLLLESII LKTSGERIKG 900
  901 KIQQMGMVED RASDLVMKVD ALLSSQPKGE ARIEHTFAED RYSAVKIRPK EEEVYFDVVA 960
  961 VLDPVTRDAQ KLAPLLLVLK QLVDVNLRVF MNCQSKLSDL PLKSFYRYVL EPEIVFLTDS1020
 1021 SFAPGPMAKF LDMPQSPLFT LNLNTPESWM VESVHTRYDL DNIYLEEVDS VVAAEYELEY1080
 1081 LLLEGHCFDV TTGQPPRGLQ FTLGTASDPV IVDTIVMANL GYFQLKANPG AWMLRLRKGR1140
 1141 SDDIYKIYSH DGTDSPAEAD DLIVVLNNFK SKIIKVKVQK KPDMINEELL SDGTHENESG1200
 1201 FWTSIARGFT GGSNPEEPKQ EKDDVINIFS VASGHLYERF LRIMMLSVLK HTKTPVKFWF1260
 1261 LKNYLSPTFK EFIPYMAEKY GFQYELVQYK WPRWLHQQTE KQRIIWGYKI LFLDVLFPLA1320
 1321 VDKFLFVDAD QIVRTDLKEL RDFDLEGAPY GYTPFCESRR EMDGHRFWKS GYWASHLAGR1380
 1381 KYHISALYVV DLKKFRKIAA GDRLRGQYQG LSQDPNSLSN LDQDLPNNMI HQVPIKSLPQ1440
 1441 EWLWCETWCD DASKKKAKTI DLCNNPQTKE PKLQAAVRIV GEWSDYDQEI KRIYNNFLDE1500
 1501 KERGTLEGYQ STDRKHPGGD THSEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle