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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116310992
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKEAFRRI IFCVLLLLCV SCKCLTSEVN TTQLAVLKVD ASPQHARKIP ETLFGIFFEE  60
   61 INHAGAGGIW AELVSNRGFE AGGPNTPSSI DPWSIIGNES VISVATDRSS CFSRNIIALR 120
  121 MEVLCGDCQA GGVGIYNPGF WGMNIEDGKN YSLVMYAKSL ENTELTVSLT SSDGLQNLSS 180
  181 ATIQVAGTSN WTKLEQKLVA KGTNRTSRLQ ITTNKKGVIW LDQISLMPSD TYKGHGFRKE 240
  241 LVSMLLDLKP QFMRFPGGCF VEGQWLRNAF RWRESVGPWE ERPGHFGDVW GYWTDDGLGY 300
  301 YEFLQLSEDL GAAPIWVFNN GFSHNEEINT TAIAPFVKDI LDSLEFARGS TNSTWGSLRV 360
  361 AMGHPEPFPV KYVTIGNEDC TKKFYHGNYL KFHRAIREAY PDIQIISNCD GSSKPLDHPA 420
  421 DIYDFHVYGD SNTLFSMRNK FDSTPRNGTK AFVSEYAVSS NGVGRGTLLA SLAEAAFLTG 480
  481 LEKNSDVVQM ASYAPLFMND NDRSWNPAAV VFNSWKQYGS PSYWMQTIFR ESSGAVLHPV 540
  541 TINSMYSNSL AASAITWKAS NSSFLRVKIV NIGSNPVNLI VSTTGLEALV NMRKSTITIL 600
  601 TSKNLSDENS FSKPTNVVPV TRELPNAGEE MFAFLGPYSF TSFDLALGQQ KHVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle