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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116310694, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRAIIRRR KYALEHTNIP VLLRHSSIST FGQEKFGCEI EQSTASQNSR ESNHEKAQYI  60
   61 LRKQGLLGLS ILCHPTRGAS LASYESKPQT FGFPLGARYF LQSVRPTSST AGQPKVGILD 120
  121 ERSENQNQNQ GKKEASPEEC DQAVEGLSTA KAKAKAKLVQ EVQKSDQSII HKFWAILLGI 180
  181 GPALRAVASM SRADWAAKLK HWKDEFVSTL QHYWLGTKLL WADVRISSRL LVKLAGGKSL 240
  241 TRRERQQLTR TTADLFRLVP FAVFIIVPFM EFLLPVFLKM FPNMLPSTFQ DKMKEEEALK 300
  301 RKLKARMEYA RFLQDTAKEM AKEVQTSRSG EMKQTAEDLD EFLNKVRKGG HVSNEEILSF 360
  361 AKLFNDELTL DNMNRARLVN MCKYMGIQPF GTDHYLTFML RKKLQEIKND DKMIQAEGVE 420
  421 SLSEEELRQA CRERGHLGLL STEEMQNQLR DWLDLSLNHS VPSSLLILSR AFTMSGKMKP 480
  481 EEAVVATLSS LPDEVVDTVG TVLPSEDSVS DRKRKLEFLE MQEELIKEEE KRQEKEDKAK 540
  541 LEVPKATEED VALKEMTEPT AREEKELKKA KVEHDRKEQL CDISQALAVL ASASSVAKER 600
  601 QEFLNLVNKE IELYNTMLEK EGTEGEEEAR RAYKAAREES DHAAEIAAGE KVSSALIERV 660
  661 DAMLQKLEKE IDDVDARIGN RWQLLDSDRD GKVTPDEVAA AANYLKDTIG KEGVQELISN 720
  721 LSKDKDGKIL VEDIVKLASQ TGESNEQEET PRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle