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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116310117
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRITAPPPP SSPPSSPPPL RHSPAALGTP RSRRRHSPSP SLALTPSSSA SASTSSRPKV  60
   61 RPSPRRAYAA AQWVALPSHP AFSRGDGGEG LGGGGGGAAW DASASRLYVW DPSARGVHRI 120
  121 CVRVRDAEAG KDGEDVAVEA AVPSEMLMPE TDLGYKVTHL SLNTDGSSLL LAGSHNISIL 180
  181 YVHERVSEDG DKVICRTVPV ASQILPSNND GIKVLQTSWH PFSSSHFGVL TSDAVFRLFD 240
  241 LSFDLEQPEQ EFYLQPILPG KCQNASSICP VAFSYGSDHL WDRFSVFILF SDGSIFVLCP 300
  301 IVPFGSDYNK KHIQEIYEDV NSFGLKSSNQ NVVTNSRLAI AWLEATFPDL SRQPADNSAL 360
  361 MSRAHPYASL DDSLTLQGPL CRVCEENNEP ESKSNSCEGK AVGFVYSSVG KDSILVTAWG 420
  421 SGQLQIDALA DEIQPQWSIG IPTRLNVDSR GQIKSVAMIC DSNSEDSWAM RSYRPSSTGS 480
  481 NVKSNTDAVW MGHSPPLLRL AIVDLALAKT SNDSSLSLFL DPLVPERFYC AHGGGLDMVT 540
  541 LHFLPFSYPE MASTPPSVHP ILTTGNNEAN SPFLSGFVTI ADAYGHVQLV SITCPGECFV 600
  601 VEMKGWKEPT PLQLDIDSKS IKDVESFTTG MISKELIAGP DPPIVPSSSS LRSLTPDSIE 660
  661 GKSTLHHYIK VFHEYYVEYG HKVFIELKEH GDYLKTEIED KQKRLQAVKQ SLLSIEAKDQ 720
  721 DINNRINRAF KVYDLLEKRI EGFKILPAAN KKPLSQAEQE FKAQLDRFAD VELDALRSSI 780
  781 TALSARMKRF AHPAIGSAAG TGMSTWQTPK VGRSHVSDSQ MSLLKSSLEK LSLLNEENNV 840
  841 KLRLIEHELK NQEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle