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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116309769
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAGAMVMS GALLLLHLLA FTCVACNGGS ELPPISRRSF PKGFIFGTSS SSYQFEGGAV  60
   61 LGGRGPSIWD TFTHQSPDKI TDRSNGDVAC DSYHLYKEDV RSMKEMGMDA YRFSISWSRI 120
  121 LPSALSGGVN REGINYYNNL INELLSKGVQ PFVTLFHWDS PQALEDKYKG FLSPNIINDY 180
  181 KEYAETCFKE FGDRVKHWIT FNEPWTFCSM GYASGIMAPG RCSSWEVGKC RVGDSGREPY 240
  241 TACHHQLLAH AETVRLYKEK YQALQKGKIG IILNADWFVP LSQSKSSSDA ARRALDFMLG 300
  301 WFMDPLIRGD YPLSMRELVG NRLPEFSKEQ SGMVKGAFDF IGLNYYTSSY ADNDPPSHGH 360
  361 NNSYNTDSHA KITGSRNGIP IGPQAASFWF HIYPEGICEM LLYVKENYGN PTIYITENGV 420
  421 DEVNNKTMPL EEALKDDTRI EYYHKHLLAL LSAMRDGANV KGYFAWSLLD NFEWAEGYTV 480
  481 RFGINFVDYD DGMKRYPKNS ARWFKKFLQK SNRDGNKRLK RVAYNAFSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle