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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116309677, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPPRLLFL LVMLLVVAAP GAPVFGANAP PEVKAEIDAL LMFRSGLRDP YAAMSGWNAS  60
   61 SPSAPCSWRG VACAAGTGRV VELALPKLRL SGAISPALSS LVYLEKLSLR SNSLSGTIPA 120
  121 SLSRISSLRA VYLQYNSLSG PIPQSFLANL TNLQTFDVSG NLLSGPVPVS FPPSLKYLDL 180
  181 SSNAFSGTIP ANVSASATSL QFLNLSFNRL RGTVPASLGT LQDLHYLWLD GNLLEGTIPS 240
  241 ALSNCSALLH LSLQGNALRG ILPPAVAAIP SLQILSVSRN RLTGAIPAAA FGGVGNSSLR 300
  301 IVQVGGNAFS QVDVPVSLGK DLQVVDLRAN KLAGPFPSWL AGAGGLTVLD LSGNAFTGEV 360
  361 PPVVGQLTAL QELRLGGNAF TGTVPAEIGR CGALQVLDLE DNRFSGEVPA ALGGLRRLRE 420
  421 VYLGGNSFSG QIPASLGNLS WLEALSTPGN RLTGDLPSEL FVLGNLTFLD LSDNKLAGEI 480
  481 PPSIGNLAAL QSLNLSGNSF SGRIPSNIGN LLNLRVLDLS GQKNLSGNLP AELFGLPQLQ 540
  541 YVSLAGNSFS GDVPEGFSSL WSLRHLNLSV NSFTGSMPAT YGYLPSLQVL SASHNRICGK 600
  601 LPVELANCSN LTVLDLRSNQ LTGPIPGDFA RLGELEELDL SHNQLSRKIP PEISNCSSLV 660
  661 TLKLDDNHLG GEIPASLSNL SKLQTLDLSS NNLTGSIPAS LAQIPGMLSL NVSHNELSGE 720
  721 IPAMLGSRFG TPSVFASNPN LCGPPLENEC SAYWQHRRRQ RLQRLALLIG VVAATVLLLV 780
  781 LFCCCCVYSL LRWRRRFIEK RDGVKKRRRS PGRGSGSSGT STDSVSQPKL IMFNSRITYA 840
  841 DTVEATRQFD EENVLSRGRH GLVFKACYND GTVLAILRLP STSSDGAVVI EEGSFRKEAE 900
  901 SLGKVKHRNL TVLRGYYAGP PPDVRLLVYD YMPNGNLATL LQEASHQDGH ILNWPMRHLI 960
  961 ALGVSRGLAF LHQSGVVHGD VKPQNILFDA DFEPHLSDFG LEPMVVTAGA AAAAAAASTS1020
 1021 ATTTVGSLGY VAPDAAAAGQ ATREGDVYSF GIVLLELLTG RRPGMFAGED EDIVKWVKRQ1080
 1081 LQRGAVAELL EPGLLELDPE SSEWEEFLLG IKVGLLCTAP DPLDRPAMGD VVFMLEGCRV1140
 1141 GPDIPSSADP TSQPSPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle