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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|222628885
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVAGSASA GANGSAAAHR VGAPTNPMAT ALLTDQYQFS MAYAYWKAGK HADRAVFDLY  60
   61 FRKNPFGGEF TVFAGLEECI KFIANFKFTE DDILFLQSVM PMCEDAFFDY LRKTDCSDVE 120
  121 VYSIPEGSVV FPKVPLMRVE GPVAVVQLLE TPFVNLINYA SLVTTNAARH RHVAGKSKVL 180
  181 LEFGLRRAQG PDGAISASKY CFMGGFDATS NVLAGNLFGI PLRGTHSHAY VSSYMSLDEI 240
  241 PDKSLKSKDG SRVCKDFVSL VKEWLQKIQL ADSLCGVFGE TNQSELAAFA SYALAFPTNF 300
  301 LALVDTYDVM RSGIPNFCAV ALALHDLGYK ASGIRLDSGD LAYLSIEARK VFRTLEKEFN 360
  361 VPAFGKMIIT ASNDLNEETI DALNKQGHEV DSFGIGTYLV TCYSQAALGC VFKLVEINSR 420
  421 PRIKLSEDVA KVSIPCKKRC FRLYGKEGYP LVDIMMRESE PSPKAGERIL CRHPFLESKR 480
  481 AYVVPQHVEE LLQCYWPGTS NKPRVELPSL EEIRGRCMQQ LEKLRPDHIR RLNPTPYKVS 540
  541 VSAKLYEFIH SLWLNEAPVG ELQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle