YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116309795
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLALLLGSS SSSLAAPHPA CSSRRKCRPA GRNNFRCSLH DKVPLNAHGV LSTKLLSCLA  60
   61 ASLVFISPPC QAIPAETFVQ PKLCQVAVVA AIDKAAVPLK FDSPSDDGGT GLMMKGMTAK 120
  121 NFDPIRYSGR WFEVASLKRG FAGQGQEDCH CTQGVYSFDE KSRSIQVDTF CVHGGPDGYI 180
  181 TGIRGRVQCL SEEDMASAET DLERQEMIKG KCFLRFPTLP FIPKEPYDVL ATDYDNYAVV 240
  241 SGAKDTSFIQ IYSRTPNPGP EFIEKYKSYA ANFGYDPSKI KDTPQDCEVM STDQLGLMMS 300
  301 MPGMTEALTN QFPDLKLSAP VAFNPFTSVF DTLKKLVELY FK

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	342	0.99