YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83853823
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPFLSTSKA LCSLASRKSG VSQLIRSSKS SWKLDGCRCI TTAITGHHIQ PSFSRIGFSP  60
   61 LTGGLCNSNT NYNVVQTRQF LGCGDGEEGI LSRNYEERRV LGYSPEQLFD VVSAVDFYHG 120
  121 FVPWCQRSEI LRHYPDGSFD AELEIGFKFL VESYVSHVEL DRPKRIKTTV SQSTLFEHLI 180
  181 NIWEFNPGPV PGSCDLYFLV DFKFQSPLYR QIASMFFKEV ASRMVGSFTE RCRLVYGPEV 240
  241 RVLENSYGKR A

Type	Start	End	Confidence
Signal Peptide	1	22	0.52
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	251	0.99