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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116269131, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPEILPFAP AMPSHWLMIL EAPPSPMRSQ EAVLAWVELD LDAELRFEKS LLWLTEQGLF  60
   61 WTDGTRFESW PLGSGEHLVH GDHAGVGRLS LETEQNLQRI WYFTLAVNPQ VLRLQSSFRQ 120
  121 LTRGDQEAHG EASEYDKQVC PVCLSPKPAN SDICPTCDPE DDKPASTWTL FKLWRFAKPY 180
  181 QHQLLLGFIL TLLSTGATLI PPYLTMPLMD HVLIPYERGN PIDFHLATKY LLALFGASIV 240
  241 AWGLGWWKTY LLALVSERIG ADLRNTTFEH LLKLSLEYFG GKRTGDLIAR IGAETDRICV 300
  301 FLSLYALDFI TDVLMITMTA AILVSIDPLL ALVTLAPLPF IVWMIHAVRD RLRFGFEKID 360
  361 RIWSEVTNIL ADTIPGIRVV KAFAQEDREL KRFVDSNKHN LLINDRVNRV WGLFSPTVTL 420
  421 LTETGLLVVW GFGIWQVAHR RISVGVLIAF LAYIGRFYVR LDSMSRIVSH TQKAAAGAKR 480
  481 IFDILDHVSS VPEPMNPAPL GPVKGGISLR GVGFRYGNRA VSKGIDLDIA PGEMIGLVGH 540
  541 SGSGKSTLVN LICRFYDVSS GSIALDGRDI RSIGIADYRK CIGLVLQEPF LFFGTIAENI 600
  601 AYGKPDATRE EIIEAARAAH AHDFILRLPL GYDSLVGERG QSLSGGERQR ISIARALLIN 660
  661 PAILILDEAT SSVDTTTEKE IQRALDNLVK GRTTIAIAHR LSTLRKADRL VVLDKGEIVE 720
  721 IGSHDQLMEA QGAYYVLYQA QLRHAAELVE GGAIGESLEE RQEERLEEAA KDIGGGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle