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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: WAKLD_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKETQNLQC IPLVISVLSL FGVSSARKPP YLCNRVCGGI SIPFPFGIGG KECYLNPWYE  60
   61 VVCNTTTSVP FLSRINRELV NIYLPDPTEY YSNGVVHIKG PVTSSGCSTG TSQPLTPQPL 120
  121 NVAGQGSPYF LTDKNLLMAV GCNVKAVMMD VKSQIIGCES SCDERNSSSQ VVRNKICSGN 180
  181 KCCQTRIPEG QPQVIGVNIE IPENKNTTEG GCKVAFLTSN KYSSLNVTEP EEFHSDGYAV 240
  241 VELGWYFDTS DSRVLSPIGC MNVSDASQDG GYGSETICVC SYGYFSGFSY RSCYCNSMGY 300
  301 AGNPFLPGGC VDIDECKLEI GRKRCKDQSC VNKPGWFTCE PKKPGQIKPV FQGVLIGSAL 360
  361 LLFAFGIFGL YKFIKKQRRS SRMRVFFRRN GGMLLKQQLA RKEGNVEMSK IFSSNELEKA 420
  421 TDNFNTNRVL GQGGQGTVYK GMLVDGRIVA VKRSKAMDED KVEEFINEVV VLAQINHRNI 480
  481 VKLLGCCLET EVPVLVYEFV PNGDLCKRLR DECDDYIMTW EVRLHIAIEI AGALSYLHSA 540
  541 ASFPIYHRDI KTTNILLDEK YQVKVSDFGT SRSVTIDQTH LTTQVAGTFG YVDPEYFQSS 600
  601 KFTDKSDVYS FGVVLVELIT GKNPSSRVQS EENRGFAAHF VAAVKENRFL DIVDERIKDE 660
  661 CNLDQVMAVA KLAKRCLNRK GKKRPNMREV SVELERIRSS SYKSEIHNDD DDDDDDDDED 720
  721 DQAMELNIEE TWDVGMTAPA SMFNNGSPAS DVEPLVPLRT W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle