YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OR9G1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSNHTVTE FILLGFTTDP GMQLGLFVVF LGVYSLTVVG NSTLIVLICN DSCLHTPMYF  60
   61 FTGNLSFLDL WYSSVYTPKI LVTCISEDKS ISFAGCLCQF FFSAGLAYSE CYLLAAVAYD 120
  121 RYVAISKPLL YAQAMSIKLC ALLVAVSYCG GFINSSIITK KTFSFNFCRE NIIDDFFCDL 180
  181 LPLVELACGE KGGYKIMMYF LLASNVICPA VLILASYLFI ITSVLRISSS KGYLKAFSTC 240
  241 SSHLTSVTLY YGSILYIYAL PRSSYSFDMD KIVSTFYTVV FPMLNLMIYS LRNKDVKEAL 300
  301 KKLLP

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.49
Transmembrane Helix	21	48	0.73
Cytoplasmic	49	54	0.39
Transmembrane Helix	55	73	0.49
Non-Cytoplasmic	74	95	0.55
Transmembrane Helix	96	119	0.61
Cytoplasmic	120	134	0.71
Transmembrane Helix	135	157	0.83
Non-Cytoplasmic	158	200	0.83
Transmembrane Helix	201	221	0.92
Cytoplasmic	222	238	0.67
Transmembrane Helix	239	260	0.80
Non-Cytoplasmic	261	271	0.87
Transmembrane Helix	272	291	0.86
Cytoplasmic	292	305	0.88