YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FAM3D
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSGVLRLL ALIFAIVTTW MFIRSYMSFS MKTIRLPRWL AASPTKEIQV KKYKCGLIKP  60
   61 CPANYFAFKI CSGAANVVGP TMCFEDRMIM SPVKNNVGRG LNIALVNGTT GAVLGQKAFD 120
  121 MYSGDVMHLV KFLKEIPGGA LVLVASYDDP GTKMNDESRK LFSDLGSSYA KQLGFRDSWV 180
  181 FIGAKDLRGK SPFEQFLKNS PDTNKYEGWP ELLEMEGCMP PKPF

Type	Start	End	Confidence
Cytoplasmic	1	6	0.48
Transmembrane Helix	7	27	0.73
Non-Cytoplasmic	28	224	0.71