YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116184449
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPKLVLKFL TSIVFVSLEP PLSNHPFTPQ DELFMRRAMV LAEQAEAEGE VPVGAVLVKD  60
   61 GEIIAEGWNR SIGTNDATAH AEIQTLRKAG QKIENYRLLD TTLYVTLEPC PMCAGALLHS 120
  121 RVKRVVFGAP DLKAGAAGTV LNLFESQAAY HYALVEKGLL EDECRTQLQA FFKRRRKEIK 180
  181 AKKQAQKALE NGESGQNYGN SES

Type	Start	End	Confidence
Signal Peptide	1	23	0.80
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	203	0.99