YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119112425, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKQQEQEN IYLFVPNIIG YARIVLAIVS FYYMPTDYVI ASWCYIISVL LDALDGHAAR  60
   61 HFNQSTKFGA MLDQLTDRCG TCGLLVTLSY FYPKYMFWFQ LSMAIDVACH WFYLHTTVLQ 120
  121 GKTSHKFIDM SGNPIMRVYY TNRTVLGFMC LFNELFYAAL YLLHFTPGPL LLGFSTFKLL 180
  181 AIVSFPVAVV KTGISVIHGF VASCNIGVID VAERAAQRER EANKKPQ

Type	Start	End	Confidence
Cytoplasmic	1	10	0.93
Transmembrane Helix	11	33	0.83
Non-Cytoplasmic	34	96	0.53
Transmembrane Helix	97	119	0.73
Cytoplasmic	120	139	0.87
Transmembrane Helix	140	163	0.82
Non-Cytoplasmic	164	178	0.61
Transmembrane Helix	179	209	0.59
Cytoplasmic	210	227	0.88