YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|118781278, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASLLLRNA CRRTLLQGYQ STNAALPLLA ARTIVLKPVQ ADVRPGESHD DRNARLKRPQ  60
   61 SPHLTIYSFQ LTSMLSITHR FTGLALTGYI TALGLGALAM PHDATHYLTM LEGLSAPTLI 120
  121 ALKFTMAYPF AYHTVNGVRH LFWDMGKFLT IKEVYTTGYT MLGVSGVLAG LLTAL

Type	Start	End	Confidence
Cytoplasmic	1	80	0.91
Transmembrane Helix	81	100	0.91
Non-Cytoplasmic	101	113	0.74
Transmembrane Helix	114	135	0.75
Cytoplasmic	136	153	0.72
Transmembrane Helix	154	174	0.86
Non-Cytoplasmic	175	175	0.84